يُعد المشي في ستوني بروك وسيلة ممتعة لاستكشاف بعض المناطق، خاصة حول الجامعة ومنطقة "ثري فيليج" القريبة، حيث تتوفر مناطق مناسبة للمشاة وأجواء طبيعية جميلة. ومع ذلك، فإن الطابع السكني للمنطقة يعني أن بعض الوجهات قد تكون متباعدة، مما يجعل المشي لمسافات طويلة أقل عملية. تدعم التحسينات في الأرصفة والمظهر العام للشوارع في بعض المناطق وصول المشاة، لكن البنية التحتية بشكل عام قد لا تعطي الأولوية للمشي كوسيلة رئيسية للتنقل. كما أن تغيرات الطقس الموسمية، بما في ذلك الشتاء البارد والصيف الرطب، قد تؤثر أيضاً على راحة المشي.

For those looking to bike in Stony Brook, it can be a practical way to get around, especially for shorter distances. The area features some bike-friendly infrastructure, including paths and bike racks, particularly around Stony Brook University. However, the ease of biking may vary depending on specific routes, as some areas may lack dedicated bike lanes. The region’s terrain is generally manageable for cyclists, but distances between destinations could be a consideration for some. Additionally, Stony Brook University offers a bike share program, which can be a convenient option for getting around campus and nearby areas.

Public transit options in Stony Brook include the Long Island Railroad (LIRR) and Suffolk County Transit buses. The LIRR provides connections to nearby areas and New York City, while Suffolk County Transit buses serve local routes, including access to Stony Brook University. The infrastructure supports these services with designated stops and schedules, though the spread-out nature of the area may make some destinations less convenient to reach by bus. Weather conditions could occasionally impact transit schedules, so planning ahead is recommended for smooth travel.

Ferries provide a practical transportation option for accessing Stony Brook, especially for those traveling from Connecticut. The Cross Sound Ferry operates year-round between New London, Connecticut, and Orient Point, New York, with sailings accommodating cars, bicycles, and pedestrians. The trip typically takes about 80 minutes. From Orient Point, Stony Brook is approximately a 50-mile drive west. While ferries provide a scenic and efficient way to cross Long Island Sound, their use for local travel within Stony Brook is limited due to the lack of direct ferry routes to the town itself.